Publications
Learn more about the work that we do in the Rajeshwar Awatramani Laboratory through our recent publications.
- Gaertner Z, Oram C, Schneeweis A, Schonfeld E, Bolduc C, Chen C, Dombeck D, Parisiadou L, Poulin JF, Awatramani R Molecular and spatial transcriptomic classification of midbrain dopamine neurons and their alterations in a LRRK2G2019S model of Parkinson's disease. bioRxiv 2024 Sep 25;. pii:2024.06.06.597807
- Pulcrano S, De Gregorio R, De Sanctis C, Volpicelli F, Piscitelli RM, Speranza L, Perrone-Capano C, di Porzio U, Caiazzo M, Martini A et al. miR-218 Promotes Dopaminergic Differentiation and Controls Neuron Excitability and Neurotransmitter Release through the Regulation of a Synaptic-Related Genes Network. J Neurosci 2023 Nov 29;43(48):8104-8125. doi:10.1523/JNEUROSCI.0431-23.2023
- Buck SA, Rubin SA, Kunkhyen T, Treiber CD, Xue X, Fenno LE, Mabry SJ, Sundar VR, Yang Z, Shah D et al. Sexually dimorphic mechanisms of VGLUT-mediated protection from dopaminergic neurodegeneration. bioRxiv 2023 Oct 03;. pii:2023.10.02.560584
- Azcorra M, Gaertner Z, Davidson C, He Q, Kim H, Nagappan S, Hayes CK, Ramakrishnan C, Fenno L, Kim YS et al. Unique functional responses differentially map onto genetic subtypes of dopamine neurons. Nat Neurosci 2023 Oct;26(10):1762-1774. doi:10.1038/s41593-023-01401-9
- Lane G, Zhou G, Hultquist JF, Simons LM, Redondo RL, Ozer EA, McCarthy DM, Ison MG, Achenbach CJ, Wang X et al. Quantity of SARS-CoV-2 RNA copies exhaled per minute during natural breathing over the course of COVID-19 infection. medRxiv 2023 Sep 08;. pii:2023.09.06.23295138
- Jang G, Contreras Castillo S, Esteva E, Upadhaya S, Feng J, Adams NM, Richard E, Awatramani R, Sawai CM, Reizis B Stem cell decoupling underlies impaired lymphoid development during aging. Proc Natl Acad Sci U S A 2023 May 30;120(22):e2302019120. pii:e2302019120
- Gaertner Z, Azcorra M, Dombeck DA, Awatramani R Molecular heterogeneity in the substantia nigra: A roadmap for understanding PD motor pathophysiology. Neurobiol Dis 2022 Dec;175:105925. doi:10.1016/j.nbd.2022.105925
- Ramesh R, Manurung Y, Ma KH, Blakely T, Won S, Moreno-Ramos OA, Wyatt E, Awatramani R, Svaren J JUN Regulation of Injury-Induced Enhancers in Schwann Cells. J Neurosci 2022 Aug 24;42(34):6506-6517. doi:10.1523/JNEUROSCI.2533-21.2022
- Godsel LM, Roth-Carter QR, Koetsier JL, Tsoi LC, Huffine AL, Broussard JA, Fitz GN, Lloyd SM, Kweon J, Burks HE et al. Translational implications of Th17-skewed inflammation due to genetic deficiency of a cadherin stress sensor. J Clin Invest 2022 Feb 01;132(3). pii:e144363
- Earley AM, Burbulla LF, Krainc D, Awatramani R Identification of ASCL1 as a determinant for human iPSC-derived dopaminergic neurons. Sci Rep 2021 Nov 15;11(1):22257. pii:22257
- Pereira Luppi M, Azcorra M, Caronia-Brown G, Poulin JF, Gaertner Z, Gatica S, Moreno-Ramos OA, Nouri N, Dubois M, Ma YC et al. Sox6 expression distinguishes dorsally and ventrally biased dopamine neurons in the substantia nigra with distinctive properties and embryonic origins. Cell Rep 2021 Nov 09;37(6):109975. doi:10.1016/j.celrep.2021.109975
- Yang B, Sanches-Padilla J, Kondapalli J, Morison SL, Delpire E, Awatramani R, Surmeier DJ Locus coeruleus anchors a trisynaptic circuit controlling fear-induced suppression of feeding. Neuron 2021 Mar 03;109(5):823-838.e6. doi:10.1016/j.neuron.2020.12.023
- Kouwenhoven WM, Fortin G, Penttinen AM, Florence C, Delignat-Lavaud B, Bourque MJ, Trimbuch T, Luppi MP, Salvail-Lacoste A, Legault P et al. VGluT2 Expression in Dopamine Neurons Contributes to Postlesional Striatal Reinnervation. J Neurosci 2020 Oct 21;40(43):8262-8275. doi:10.1523/JNEUROSCI.0823-20.2020
- Awatramani R, Lévesque M "The One Who Guides" Nigral Neuron Migration. Neuron 2020 Aug 19;107(4):595-596. doi:10.1016/j.neuron.2020.07.030
- Soden ME, Chung AS, Cuevas B, Resnick JM, Awatramani R, Zweifel LS Anatomic resolution of neurotransmitter-specific projections to the VTA reveals diversity of GABAergic inputs. Nat Neurosci 2020 Aug;23(8):968-980. doi:10.1038/s41593-020-0657-z
- Poulin JF, Luppi MP, Hofer C, Caronia G, Hsu PK, Chan CS, Awatramani R PRISM: A Progenitor-Restricted Intersectional Fate Mapping Approach Redefines Forebrain Lineages. Dev Cell 2020 Jun 22;53(6):740-753.e3. doi:10.1016/j.devcel.2020.05.019
- Hunker AC, Soden ME, Krayushkina D, Heymann G, Awatramani R, Zweifel LS Conditional Single Vector CRISPR/SaCas9 Viruses for Efficient Mutagenesis in the Adult Mouse Nervous System. Cell Rep 2020 Mar 24;30(12):4303-4316.e6. doi:10.1016/j.celrep.2020.02.092
- Poulin JF, Gaertner Z, Moreno-Ramos OA, Awatramani R Classification of Midbrain Dopamine Neurons Using Single-Cell Gene Expression Profiling Approaches. Trends Neurosci 2020 Mar;43(3):155-169. doi:10.1016/j.tins.2020.01.004
- Abecassis ZA, Berceau BL, Win PH, García D, Xenias HS, Cui Q, Pamukcu A, Cherian S, Hernández VM, Chon U et al. Npas1+-Nkx2.1+ Neurons Are an Integral Part of the Cortico-pallido-cortical Loop. J Neurosci 2020 Jan 22;40(4):743-768. doi:10.1523/JNEUROSCI.1199-19.2019
- Cedernaes J, Huang W, Ramsey KM, Waldeck N, Cheng L, Marcheva B, Omura C, Kobayashi Y, Peek CB, Levine DC et al. Transcriptional Basis for Rhythmic Control of Hunger and Metabolism within the AgRP Neuron. Cell Metab 2019 May 07;29(5):1078-1091.e5. doi:10.1016/j.cmet.2019.01.023
- Chuhma N, Mingote S, Yetnikoff L, Kalmbach A, Ma T, Ztaou S, Sienna AC, Tepler S, Poulin JF, Ansorge M et al. Dopamine neuron glutamate cotransmission evokes a delayed excitation in lateral dorsal striatal cholinergic interneurons. Elife 2018 Oct 08;7. pii:e39786
- Poulin JF, Caronia G, Hofer C, Cui Q, Helm B, Ramakrishnan C, Chan CS, Dombeck DA, Deisseroth K, Awatramani R Mapping projections of molecularly defined dopamine neuron subtypes using intersectional genetic approaches. Nat Neurosci 2018 Sep;21(9):1260-1271. doi:10.1038/s41593-018-0203-4
- Lin HP, Oksuz I, Svaren J, Awatramani R Egr2-dependent microRNA-138 is dispensable for peripheral nerve myelination. Sci Rep 2018 Feb 28;8(1):3817. pii:3817
- Nouri N, Awatramani R A novel floor plate boundary defined by adjacent En1 and Dbx1 microdomains distinguishes midbrain dopamine and hypothalamic neurons. Development 2017 Mar 01;144(5):916-927. doi:10.1242/dev.144949
- Cui Q, Pitt JE, Pamukcu A, Poulin JF, Mabrouk OS, Fiske MP, Fan IB, Augustine EC, Young KA, Kennedy RT et al. Blunted mGluR Activation Disinhibits Striatopallidal Transmission in Parkinsonian Mice. Cell Rep 2016 Nov 22;17(9):2431-2444. doi:10.1016/j.celrep.2016.10.087
- Poulin JF, Tasic B, Hjerling-Leffler J, Trimarchi JM, Awatramani R Disentangling neural cell diversity using single-cell transcriptomics. Nat Neurosci 2016 Aug 26;19(9):1131-41. doi:10.1038/nn.4366
- Caronia-Brown G, Anderegg A, Awatramani R Expression and functional analysis of the Wnt/beta-catenin induced mir-135a-2 locus in embryonic forebrain development. Neural Dev 2016 Apr 05;11:9. pii:9
- Anderegg A, Poulin JF, Awatramani R Molecular heterogeneity of midbrain dopaminergic neurons--Moving toward single cell resolution. FEBS Lett 2015 Dec 21;589(24 Pt A):3714-26. doi:10.1016/j.febslet.2015.10.022
- Lin HP, Oksuz I, Hurley E, Wrabetz L, Awatramani R Microprocessor complex subunit DiGeorge syndrome critical region gene 8 (Dgcr8) is required for schwann cell myelination and myelin maintenance. J Biol Chem 2015 Oct 02;290(40):24294-307. doi:10.1074/jbc.M115.636407
- Nouri N, Patel MJ, Joksimovic M, Poulin JF, Anderegg A, Taketo MM, Ma YC, Awatramani R Excessive Wnt/beta-catenin signaling promotes midbrain floor plate neurogenesis, but results in vacillating dopamine progenitors. Mol Cell Neurosci 2015 Sep;68:131-42. doi:10.1016/j.mcn.2015.07.002
- Anderegg A, Awatramani R Making a mes: A transcription factor-microRNA pair governs the size of the midbrain and the dopaminergic progenitor pool. Neurogenesis (Austin) 2015;2(1):e998101. pii:e998101
- Issler O, Haramati S, Paul ED, Maeno H, Navon I, Zwang R, Gil S, Mayberg HS, Dunlop BW, Menke A et al. MicroRNA 135 is essential for chronic stress resiliency, antidepressant efficacy, and intact serotonergic activity. Neuron 2014 Jul 16;83(2):344-360. doi:10.1016/j.neuron.2014.05.042
- Joksimovic M, Awatramani R Wnt/β-catenin signaling in midbrain dopaminergic neuron specification and neurogenesis. J Mol Cell Biol 2014 Feb;6(1):27-33. doi:10.1093/jmcb/mjt043
- Anderegg A, Lin HP, Chen JA, Caronia-Brown G, Cherepanova N, Yun B, Joksimovic M, Rock J, Harfe BD, Johnson R et al. An Lmx1b-miR135a2 regulatory circuit modulates Wnt1/Wnt signaling and determines the size of the midbrain dopaminergic progenitor pool. PLoS Genet 2013;9(12):e1003973. pii:e1003973
- Oommen S, Otsuka-Tanaka Y, Imam N, Kawasaki M, Kawasaki K, Jalani-Ghazani F, Anderegg A, Awatramani R, Hindges R, Sharpe PT et al. Distinct roles of microRNAs in epithelium and mesenchyme during tooth development. Dev Dyn 2012 Sep;241(9):1465-72. doi:10.1002/dvdy.23828
- He X, Yu Y, Awatramani R, Lu QR Unwrapping myelination by microRNAs. Neuroscientist 2012 Feb;18(1):45-55. doi:10.1177/1073858410392382
- Joksimovic M, Patel M, Taketo MM, Johnson R, Awatramani R Ectopic Wnt/beta-catenin signaling induces neurogenesis in the spinal cord and hindbrain floor plate. PLoS One 2012;7(1):e30266. pii:e30266
- Yun B, Anderegg A, Menichella D, Wrabetz L, Feltri ML, Awatramani R MicroRNA-deficient Schwann cells display congenital hypomyelination. J Neurosci 2010 Jun 02;30(22):7722-8. doi:10.1523/JNEUROSCI.0876-10.2010
- Joksimovic M, Anderegg A, Roy A, Campochiaro L, Yun B, Kittappa R, McKay R, Awatramani R Spatiotemporally separable Shh domains in the midbrain define distinct dopaminergic progenitor pools. Proc Natl Acad Sci U S A 2009 Nov 10;106(45):19185-90. doi:10.1073/pnas.0904285106