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Publications

Learn more about the work that we do in the Bacterial Omics and Pathogenesis Lab through our recent publications.

  1. Spiga L, Fansler RT, Wu Y, Grote A, Langford-Butler M, Miller AK, Neal M, Hale OF, Singla D, Calcutt MW  et al.  An anaerobic pathogen rewires host metabolism to fuel oxidative growth in the inflamed gut.  Cell  2026 Apr 30;. pii:S0092-8674(26)00401-0
  2. Scarpa de Mello S, Schultz B, Goh B, Grote A, Shea T, Muscato J, Oh SF, Manson AL, Earl AM, Walker S  et al.  Loss of LafB activity reverses daptomycin resistance in E. faecium.  mBio  2026 Jan 14;17(1):e0071525. pii:e00715-25
  3. Grote A, Hendin N, Amit S, Adani B, Rahav G, Adler A, Livny J, Gal-Mor O, Earl AM  Genetic diversity of Salmonella enterica during acute human infections.  Gut Microbes  2025 Dec;17(1):2491666. pii:2491666
  4. Grote A  INDELible impact: How structural variants drive virulence and resistance.  Cell Host Microbe  2024 Nov 13;32(11):1882-1883. doi:10.1016/j.chom.2024.10.007
  5. Grote A, Piscon B, Manson AL, Adani B, Cohen H, Livny J, Earl AM, Gal-Mor O  Persistent Salmonella infections in humans are associated with mutations in the BarA/SirA regulatory pathway.  Cell Host Microbe  2024 Jan 10;32(1):79-92.e7. doi:10.1016/j.chom.2023.12.001
  6. Grote A, Earl AM  Within-host evolution of bacterial pathogens during persistent infection of humans.  Curr Opin Microbiol  2022 Dec;70:102197. doi:10.1016/j.mib.2022.102197
  7. Zheng EJ, Andrews IW, Grote AT, Manson AL, Alcantar MA, Earl AM, Collins JJ  Modulating the evolutionary trajectory of tolerance using antibiotics with different metabolic dependencies.  Nat Commun  2022 May 09;13(1):2525. pii:2525
  8. Brennan-Krohn T, Grote A, Rodriguez S, Kirby JE, Earl AM  Transcriptomics Reveals How Minocycline-Colistin Synergy Overcomes Antibiotic Resistance in Multidrug-Resistant Klebsiella pneumoniae.  Antimicrob Agents Chemother  2022 Mar 15;66(3):e0196921. pii:e01969-21