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Northwestern University Feinberg School of Medicine
Choi Lab

Publications

Learn more about the work that we do in the Choi Laboratory through our recent publications.

  1. Akaike T, Thakuria M, Silk AW, Hippe DS, Park SY, So NA, Maloney NJ, Gunnell L, Eschholz A, Kim EY  et al.  Circulating Tumor DNA Assay Detects Merkel Cell Carcinoma Recurrence, Disease Progression, and Minimal Residual Disease: Surveillance and Prognostic Implications.  J Clin Oncol  2024 Sep 10;42(26):3151-3161. doi:10.1200/JCO.23.02054
  2. Reinstein ZZ, Zhang Y, Ospina OE, Nichols MD, Chu VA, Pulido AM, Prieto K, Nguyen JV, Yin R, Moran Segura C  et al.  Preexisting Skin-Resident CD8 and γδ T-cell Circuits Mediate Immune Response in Merkel Cell Carcinoma and Predict Immunotherapy Efficacy.  Cancer Discov  2024 Sep 04;14(9):1631-1652. doi:10.1158/2159-8290.CD-23-0798
  3. Choi J, Lee H, Kuang A, Huerta-Chagoya A, Scholtens DM, Choi D, Han M, Lowe WL, Manning AK, Jang HC  et al.  Genome-Wide Polygenic Risk Score Predicts Incident Type 2 Diabetes in Women With History of Gestational Diabetes.  Diabetes Care  2024 Sep 01;47(9):1622-1629. doi:10.2337/dc24-0022
  4. Kim D, Kim G, Yu R, Lee J, Kim S, Gleason MR, Qiu K, Montauti E, Wang LL, Fang D  et al.  Inhibitory co-receptor Lag3 supports Foxp3+ regulatory T cell function by restraining Myc-dependent metabolic programming.  Immunity  2024 Aug 23;. pii:S1074-7613(24)00407-2
  5. Hayrapetyan A, Tumasyan A, Adam W, Andrejkovic JW, Bergauer T, Chatterjee S, Damanakis K, Dragicevic M, Hussain PS, Jeitler M  et al.  Measurement of Energy Correlators inside Jets and Determination of the Strong Coupling α_{S}(m_{Z}).  Phys Rev Lett  2024 Aug 16;133(7):071903. doi:10.1103/PhysRevLett.133.071903
  6. Myers CS, Williams E, Cornejo CB, Pongas G, Toomey NL, Sanches JA, Battistella M, Mo S, Pulitzer M, Moskaluk CA  et al.  Distinctive genomic features of human T-lymphotropic virus type 1-related adult T-cell leukemia-lymphoma in Western populations.  Haematologica  2024 Aug 08;. doi:10.3324/haematol.2024.285233
  7. Law C, Wacleche VS, Cao Y, Pillai A, Sowerby J, Hancock B, Horisberger A, Bracero S, Skidanova V, Li Z  et al.  Publisher Correction: Interferon subverts an AHR-JUN axis to promote CXCL13+ T cells in lupus.  Nature  2024 Aug;632(8025):E6. doi:10.1038/s41586-024-07845-8
  8. Tumasyan A, Adam W, Andrejkovic JW, Bergauer T, Chatterjee S, Damanakis K, Dragicevic M, Escalante Del Valle A, Hussain PS, Jeitler M  et al.  Observation of the ϒ(3S) Meson and Suppression of ϒ States in Pb-Pb Collisions at sqrt[s_{NN}]=5.02  TeV.  Phys Rev Lett  2024 Jul 12;133(2):022302. doi:10.1103/PhysRevLett.133.022302
  9. Hayrapetyan A, Tumasyan A, Adam W, Andrejkovic JW, Bergauer T, Chatterjee S, Damanakis K, Dragicevic M, Escalante Del Valle A, Hussain PS  et al.  Search for Narrow Trijet Resonances in Proton-Proton Collisions at sqrt[s]=13  TeV.  Phys Rev Lett  2024 Jul 05;133(1):011801. doi:10.1103/PhysRevLett.133.011801
  10. Law C, Wacleche VS, Cao Y, Pillai A, Sowerby J, Hancock B, Horisberger A, Bracero S, Skidanova V, Li Z  et al.  Interferon subverts an AHR-JUN axis to promote CXCL13+ T cells in lupus.  Nature  2024 Jul;631(8022):857-866. doi:10.1038/s41586-024-07627-2
  11. Hayrapetyan A, Tumasyan A, Adam W, Andrejkovic JW, Bergauer T, Chatterjee S, Damanakis K, Dragicevic M, Hussain PS, Jeitler M  et al.  Combination of Measurements of the Top Quark Mass from Data Collected by the ATLAS and CMS Experiments at sqrt[s]=7 and 8 TeV.  Phys Rev Lett  2024 Jun 28;132(26):261902. doi:10.1103/PhysRevLett.132.261902
  12. Iamsawat S, Yu R, Kim S, Dvorina N, Qiu K, Choi J, Baldwin WM, Min B  Single-Cell Analysis Uncovers Striking Cellular Heterogeneity of Lung-Infiltrating Regulatory T Cells during Eosinophilic versus Neutrophilic Allergic Airway Inflammation.  J Immunol  2024 Jun 15;212(12):1867-1876. doi:10.4049/jimmunol.2300646
  13. Hayrapetyan A, Tumasyan A, Adam W, Andrejkovic JW, Bergauer T, Chatterjee S, Damanakis K, Dragicevic M, Hussain PS, Jeitler M  et al.  Search for Baryon Number Violation in Top Quark Production and Decay Using Proton-Proton Collisions at sqrt[s]=13  TeV.  Phys Rev Lett  2024 Jun 14;132(24):241802. doi:10.1103/PhysRevLett.132.241802
  14. Assatova B, Willim R, Trevisani C, Haskett G, Kariya KM, Chopra K, Park SR, Tolstorukov MY, McCabe SM, Duffy J  et al.  KLRG1 Cell Depletion as a Novel Therapeutic Strategy in Patients with Mature T-Cell Lymphoma Subtypes.  Clin Cancer Res  2024 Jun 03;30(11):2514-2530. doi:10.1158/1078-0432.CCR-23-3504
  15. Chung C, Wu B, LeWitt T, Griffin T, Hooper M, Zhou XA, Choi J, Guitart J  Interstitial mycosis fungoides: A rare presentation of mycosis fungoides with overlapping granulomatous and folliculotropic features.  J Cutan Pathol  2024 Jun;51(6):459-467. doi:10.1111/cup.14599
  16. Oh K, Rymer WZ, Choi J  A pilot study: effect of somatosensory loss on motor corrections in response to unknown loads in a reaching task by chronic stroke survivors.  Biomed Eng Lett  2024 May;14(3):523-535. doi:10.1007/s13534-024-00348-5
  17. Wannan CMJ, Nelson B, Addington J, Allott K, Anticevic A, Arango C, Baker JT, Bearden CE, Billah T, Bouix S  et al.  Accelerating Medicines Partnership® Schizophrenia (AMP® SCZ): Rationale and Study Design of the Largest Global Prospective Cohort Study of Clinical High Risk for Psychosis.  Schizophr Bull  2024 Apr 30;50(3):496-512. doi:10.1093/schbul/sbae011
  18. Chen ST, Semenov YR, Alloo A, Bach DQ, Betof Warner A, Bougrine A, Burton L, Cappelli LC, Castells M, Cohen J  et al.  Defining D-irAEs: consensus-based disease definitions for the diagnosis of dermatologic adverse events from immune checkpoint inhibitor therapy.  J Immunother Cancer  2024 Apr 10;12(4). pii:e007675
  19. Woods SW, Parker S, Kerr MJ, Walsh BC, Wijtenburg SA, Prunier N, Nunez AR, Buccilli K, Mourgues-Codern C, Brummitt K  et al.  Development of the PSYCHS: Positive SYmptoms and Diagnostic Criteria for the CAARMS Harmonized with the SIPS.  Early Interv Psychiatry  2024 Apr;18(4):255-272. doi:10.1111/eip.13457
  20. Hayrapetyan A, Tumasyan A, Adam W, Andrejkovic JW, Bergauer T, Chatterjee S, Damanakis K, Dragicevic M, Escalante Del Valle A, Hussain PS  et al.  Observation of WWγ Production and Search for Hγ Production in Proton-Proton Collisions at sqrt[s]=13  TeV.  Phys Rev Lett  2024 Mar 22;132(12):121901. doi:10.1103/PhysRevLett.132.121901
  21. Hayrapetyan A, Tumasyan A, Adam W, Andrejkovic JW, Bergauer T, Chatterjee S, Damanakis K, Dragicevic M, Escalante Del Valle A, Hussain PS  et al.  New Structures in the J/ψJ/ψ Mass Spectrum in Proton-Proton Collisions at sqrt[s]=13  TeV.  Phys Rev Lett  2024 Mar 15;132(11):111901. doi:10.1103/PhysRevLett.132.111901
  22. Mutlu D, Rempakos A, Alexandrou M, Al-Ogaili A, Yamane M, Alaswad K, Basir M, Davies R, Choi J, Gagnor A  et al.  Update on chronic total occlusion percutaneous coronary intervention.  J Invasive Cardiol  2024 Mar;36(3). doi:10.25270/jic/23.00239
  23. Hayrapetyan A, Tumasyan A, Adam W, Andrejkovic JW, Bergauer T, Chatterjee S, Damanakis K, Dragicevic M, Escalante Del Valle A, Hussain PS  et al.  Search for Scalar Leptoquarks Produced via τ-Lepton-Quark Scattering in pp Collisions at sqrt[s]=13  TeV.  Phys Rev Lett  2024 Feb 09;132(6):061801. doi:10.1103/PhysRevLett.132.061801
  24. Garcia J, Daniels J, Lee Y, Zhu I, Cheng K, Liu Q, Goodman D, Burnett C, Law C, Thienpont C  et al.  Naturally occurring T cell mutations enhance engineered T cell therapies.  Nature  2024 Feb;626(7999):626-634. doi:10.1038/s41586-024-07018-7
  25. Mohsin N, Hunt D, Yan J, Jabbour AJ, Nghiem P, Choi J, Zhang Y, Freeman AF, Bergerson JRE, Dell'Orso S  et al.  Genetic Risk Factors for Early-Onset Merkel Cell Carcinoma.  JAMA Dermatol  2024 Feb 01;160(2):172-178. doi:10.1001/jamadermatol.2023.5362
  26. Hooper MJ, Veon FL, Enriquez GL, Nguyen M, Grimes CB, LeWitt TM, Pang Y, Case S, Choi J, Guitart J  et al.  Reply to Wu et al's US SEER analysis of sepsis in Black patients with CTCL.  J Am Acad Dermatol  2024 Feb;90(2):e79. doi:10.1016/j.jaad.2023.08.107
  27. Hayrapetyan A, Tumasyan A, Adam W, Andrejkovic JW, Bergauer T, Chatterjee S, Damanakis K, Dragicevic M, Escalante Del Valle A, Hussain PS  et al.  Search for Inelastic Dark Matter in Events with Two Displaced Muons and Missing Transverse Momentum in Proton-Proton Collisions at sqrt[s]=13  TeV.  Phys Rev Lett  2024 Jan 26;132(4):041802. doi:10.1103/PhysRevLett.132.041802
  28. Wu D, Hailer AA, Wang S, Yuan M, Chan J, El Kurdi A, Rahim M, Kondo A, Han D, Ali H  et al.  A single-cell atlas of IL-23 inhibition in cutaneous psoriasis distinguishes clinical response.  Sci Immunol  2024 Jan 26;9(91):eadi2848. doi:10.1126/sciimmunol.adi2848
  29. Aad G, Abbott B, Abeling K, Abicht NJ, Abidi SH, Aboulhorma A, Abramowicz H, Abreu H, Abulaiti Y, Acharya BS  et al.  Evidence for the Higgs Boson Decay to a Z Boson and a Photon at the LHC.  Phys Rev Lett  2024 Jan 12;132(2):021803. doi:10.1103/PhysRevLett.132.021803
  30. , Hayrapetyan A, Tumasyan A, Adam W, Andrejkovic JW, Bergauer T, Chatterjee S, Damanakis K, Dragicevic M, Hussain PS  et al.  Portable Acceleration of CMS Computing Workflows with Coprocessors as a Service.  Comput Softw Big Sci  2024;8(1):17. pii:17
  31. , Hayrapetyan A, Tumasyan A, Adam W, Andrejkovic JW, Bergauer T, Chatterjee S, Damanakis K, Dragicevic M, Del Valle AE  et al.  Search for exotic decays of the Higgs boson to a pair of pseudoscalars in the μμbb and ττbb final states.  Eur Phys J C Part Fields  2024;84(5):493. pii:493
  32. Tumasyan A, Adam W, Andrejkovic JW, Bergauer T, Chatterjee S, Damanakis K, Dragicevic M, Escalante Del Valle A, Hussain PS, Jeitler M  et al.  Probing Small Bjorken-x Nuclear Gluonic Structure via Coherent J/ψ Photoproduction in Ultraperipheral Pb-Pb Collisions at sqrt[s_{NN}]=5.02  TeV.  Phys Rev Lett  2023 Dec 29;131(26):262301. doi:10.1103/PhysRevLett.131.262301
  33. Zhang Y, Cheng K, Choi J  TCR Pathway Mutations in Mature T Cell Lymphomas.  J Immunol  2023 Nov 15;211(10):1450-1458. doi:10.4049/jimmunol.2200682
  34. Tumasyan A, Adam W, Andrejkovic JW, Bergauer T, Chatterjee S, Damanakis K, Dragicevic M, Escalante Del Valle A, Hussain PS, Jeitler M  et al.  Observation of τ Lepton Pair Production in Ultraperipheral Pb-Pb Collisions at sqrt[s_{NN}]=5.02  TeV.  Phys Rev Lett  2023 Oct 13;131(15):151803. doi:10.1103/PhysRevLett.131.151803
  35. Wartewig T, Daniels J, Schulz M, Hameister E, Joshi A, Park J, Morrish E, Venkatasubramani AV, Cernilogar FM, van Heijster FHA  et al.  PD-1 instructs a tumor-suppressive metabolic program that restricts glycolysis and restrains AP-1 activity in T cell lymphoma.  Nat Cancer  2023 Oct;4(10):1508-1525. doi:10.1038/s43018-023-00635-7
  36. Tumasyan A, Adam W, Andrejkovic JW, Bergauer T, Chatterjee S, Damanakis K, Dragicevic M, Escalante Del Valle A, Hussain PS, Jeitler M  et al.  Measurement of the Dependence of the Hadron Production Fraction Ratios f_{s}/f_{u} and f_{d}/f_{u} on B Meson Kinematic Variables in Proton-Proton Collisions at sqrt[s]=13  TeV.  Phys Rev Lett  2023 Sep 22;131(12):121901. doi:10.1103/PhysRevLett.131.121901
  37. Tumasyan A, Adam W, Andrejkovic JW, Bergauer T, Chatterjee S, Damanakis K, Dragicevic M, Escalante Del Valle A, Hussain PS, Jeitler M  et al.  Search for Exotic Higgs Boson Decays H→AA→4γ with Events Containing Two Merged Diphotons in Proton-Proton Collisions at sqrt[s]=13  TeV.  Phys Rev Lett  2023 Sep 08;131(10):101801. doi:10.1103/PhysRevLett.131.101801
  38. Tumasyan A, Adam W, Andrejkovic JW, Bergauer T, Chatterjee S, Damanakis K, Dragicevic M, Escalante Del Valle A, Hussain PS, Jeitler M  et al.  Observation of Same-Sign WW Production from Double Parton Scattering in Proton-Proton Collisions at sqrt[s]=13  TeV.  Phys Rev Lett  2023 Sep 01;131(9):091803. doi:10.1103/PhysRevLett.131.091803
  39. Hayrapetyan A, Tumasyan A, Adam W, Andrejkovic JW, Bergauer T, Chatterjee S, Damanakis K, Dragicevic M, Escalante Del Valle A, Hussain PS  et al.  Observation of the Rare Decay of the η Meson to Four Muons.  Phys Rev Lett  2023 Sep 01;131(9):091903. doi:10.1103/PhysRevLett.131.091903
  40. Tumasyan A, Adam W, Andrejkovic JW, Bergauer T, Chatterjee S, Damanakis K, Dragicevic M, Escalante Del Valle A, Hussain PS, Jeitler M  et al.  Search for Higgs Boson Decay to a Charm Quark-Antiquark Pair in Proton-Proton Collisions at sqrt[s]=13  TeV.  Phys Rev Lett  2023 Aug 11;131(6):061801. doi:10.1103/PhysRevLett.131.061801
  41. Tumasyan A, Adam W, Bergauer T, Dragicevic M, Del Valle AE, Frühwirth R, Jeitler M, Krammer N, Lechner L, Liko D  et al.  Azimuthal Correlations within Exclusive Dijets with Large Momentum Transfer in Photon-Lead Collisions.  Phys Rev Lett  2023 Aug 04;131(5):051901. doi:10.1103/PhysRevLett.131.051901
  42. Kim S, Oh YS, Lee K, Kim S, Maeng WY, Kim KS, Kim GB, Cho S, Han H, Park H  et al.  Battery-Free, Wireless, Cuff-Type, Multimodal Physical Sensor for Continuous Temperature and Strain Monitoring of Nerve.  Small  2023 Aug;19(32):e2206839. doi:10.1002/smll.202206839
  43. Tumasyan A, Adam W, Andrejkovic JW, Bergauer T, Chatterjee S, Damanakis K, Dragicevic M, Escalante Del Valle A, Hussain PS, Jeitler M  et al.  Search for Nonresonant Pair Production of Highly Energetic Higgs Bosons Decaying to Bottom Quarks.  Phys Rev Lett  2023 Jul 28;131(4):041803. doi:10.1103/PhysRevLett.131.041803
  44. Tumasyan A, Adam W, Andrejkovic JW, Bergauer T, Chatterjee S, Damanakis K, Dragicevic M, Del Valle AE, Hussain PS, Jeitler M  et al.  Search for Higgs Boson and Observation of Z Boson through Their Decay into a Charm Quark-Antiquark Pair in Boosted Topologies in Proton-Proton Collisions at sqrt[s]=13  TeV.  Phys Rev Lett  2023 Jul 28;131(4):041801. doi:10.1103/PhysRevLett.131.041801
  45. Tumasyan A, Adam W, Andrejkovic JW, Bergauer T, Chatterjee S, Damanakis K, Dragicevic M, Escalante Del Valle A, Hussain PS, Jeitler M  et al.  Probing Heavy Majorana Neutrinos and the Weinberg Operator through Vector Boson Fusion Processes in Proton-Proton Collisions at sqrt[s]=13  TeV.  Phys Rev Lett  2023 Jul 07;131(1):011803. doi:10.1103/PhysRevLett.131.011803
  46. Fernandez MF, Choi J, Sosman J  New Approaches to Targeted Therapy in Melanoma.  Cancers (Basel)  2023 Jun 17;15(12). pii:3224
  47. Zhang Y, Liu F, Zhang Y, Wang J, D'Andrea D, Walters JB, Li S, Yoon HJ, Wu M, Li S  et al.  Self-powered, light-controlled, bioresorbable platforms for programmed drug delivery.  Proc Natl Acad Sci U S A  2023 Mar 14;120(11):e2217734120. pii:e2217734120
  48. Karacsonyi J, Kostantinis S, Simsek B, Rempakos A, Allana SS, Alaswad K, Krestyaninov O, Khatri J, Poommipanit P, Jaffer FA  et al.  Angiographic Features and Clinical Outcomes of Balloon Uncrossable Lesions during Chronic Total Occlusion Percutaneous Coronary Intervention.  J Pers Med  2023 Mar 13;13(3). pii:515
  49. Nguyen M, LeWitt T, Pang Y, Bagnowski K, Espinosa ML, Choi J, Guitart J, Liszewski W, Zhou XA  Lifestyle, demographic and Skindex measures associated with cutaneous T-cell lymphoma: a single institution cohort study.  Arch Dermatol Res  2023 Mar;315(2):275-278. doi:10.1007/s00403-022-02360-0
  50. Karacsonyi J, Alaswad K, Krestyaninov O, Karmpaliotis D, Kirtane A, Ali Z, McEntegart M, Masoumi A, Poomipanit P, Jaffer FA  et al.  Single vs. multiple operators for chronic total occlusion percutaneous coronary interventions: From the PROGRESS-CTO Registry.  Catheter Cardiovasc Interv  2023 Feb;101(3):543-552. doi:10.1002/ccd.30564